ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5ZCG1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5ZCG1_F1_nD1

Q5ZCG1_F1_nD1

UID: 003449948

AlphaFold

Range: 6-305
AlphaFold: AF-Q5ZCG1
UniProt: Q5ZCG1 (all domains)
Gene: Os01g0780400

Protein: Katanin p80 WD40 repeat-containing subunit B1 homolog

3D Structure

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Related Domains

Browse other domains in WD40, ANAPC4_WD40, Beta-prop_NOL10_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40, ANAPC4_WD40, Beta-prop_NOL10_N(5.1.4.275)

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF12894ANAPC4_WD40

Anaphase-promoting complex subunit 4 WD40 domain

ClanCL0186Beta_propeller

PF23098Beta-prop_NOL10_N

Nucleolar protein 10-like, N-terminal domain

ClanCL0186Beta_propeller

External Links

AlphaFold DB: Q5ZCG1 UniProt: Q5ZCG1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-305