ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5NB85_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5NB85_F1_nD2

Q5NB85_F1_nD2

UID: 003450478

AlphaFold

Range: 116-225
AlphaFold: AF-Q5NB85
UniProt: Q5NB85 (all domains)
Gene: ARF1

Protein: Auxin response factor 1 (OsARF16)

3D Structure

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Related Domains

Browse other domains in B3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupType II restriction endonuclease effector domain(1.1.11)

FFamilyB3(1.1.11.1)

Pfam Families

B3 DNA binding domain

ClanCL0405DNA_b-psBarrel

External Links

AlphaFold DB: Q5NB85 UniProt: Q5NB85

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-225