ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0J0E7_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q0J0E7_F1_nD4

Q0J0E7_F1_nD4

UID: 003451252

AlphaFold

Range: 231-295
AlphaFold: AF-Q0J0E7
UniProt: Q0J0E7 (all domains)
Gene: Os09g0513800

Protein: RBR-type E3 ubiquitin transferase (EC 2.3.2.31)

3D Structure

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Related Domains

Browse other domains in IBR_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupIBR domain(376.1.6)

FFamilyIBR_1(376.1.6.2)

Pfam Families

IBR domain

ClanCL0229RING

External Links

AlphaFold DB: Q0J0E7 UniProt: Q0J0E7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 231-295