ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B9FNL5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/B9FNL5_F1_nD2

B9FNL5_F1_nD2

UID: 003452718

AlphaFold

Range: 131-305
AlphaFold: AF-B9FNL5
UniProt: B9FNL5 (all domains)
Gene: Os05g0274200

Protein: DNA mismatch repair protein MSH2 (DNA mismatch repair protein Msh2)

3D Structure

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Related Domains

Browse other domains in MutS_II →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyMutS_II(2484.1.1.48)

Pfam Families

PF05188MutS_II

MutS domain II

ClanCL0219RNase_H

External Links

AlphaFold DB: B9FNL5 UniProt: B9FNL5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 131-305