ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O48653_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O48653_F1_nD1

O48653_F1_nD1

UID: 003452774

AlphaFold

Range: 346-395,511-565
AlphaFold: AF-O48653
UniProt: O48653 (all domains)
Gene: Os01g0868300

Protein: DNA polymerase alpha catalytic subunit (EC 2.7.7.7)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_exo1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyDNA_pol_B_exo1(2.1.1.25)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

External Links

AlphaFold DB: O48653 UniProt: O48653

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 346-395,511-565