ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O48653_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/O48653_F1_nD3

O48653_F1_nD3

UID: 003452775

AlphaFold

Range: 1131-1310
AlphaFold: AF-O48653
UniProt: O48653 (all domains)
Gene: Os01g0868300

Protein: DNA polymerase alpha catalytic subunit (EC 2.7.7.7)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_B →

Classification

AArchitecturealpha bundles(a.7)

XX-group"thumb" domain in bacteriophage RB69-like DNA polymerase I(4969)

HH-group"thumb" domain in bacteriophage RB69-like DNA polymerase I(4969.1)

TT-group"thumb" domain in bacteriophage RB69-like DNA polymerase I(4969.1.1)

FFamilyDNA_pol_B(4969.1.1.1)

Pfam Families

PF00136DNA_pol_B

DNA polymerase family B

ClanCL0194DNA_pol_B-like

External Links

AlphaFold DB: O48653 UniProt: O48653

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1131-1310