ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5ZBG2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5ZBG2_F1_nD1

Q5ZBG2_F1_nD1

UID: 003453438

AlphaFold

Range: 11-100
AlphaFold: AF-Q5ZBG2
UniProt: Q5ZBG2 (all domains)
Gene: B1040D09.15-1

Protein: Os01g0619000 protein (Polypyrimidine tract-binding protein 1-like) (cDNA clone:001-044-B01, full insert sequence)

3D Structure

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Related Domains

Browse other domains in RRM_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q5ZBG2 UniProt: Q5ZBG2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-100