ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6YYZ1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6YYZ1_F1_nD1

Q6YYZ1_F1_nD1

UID: 003454439

AlphaFold

Range: 46-145
AlphaFold: AF-Q6YYZ1
UniProt: Q6YYZ1 (all domains)
Gene: Os08g0143400

Protein: Lysine-specific histone demethylase 1 homolog 2 (EC 1.-.-.-) (Flavin-containing amine oxidase domain-containing protein 2) (Protein LSD1-LIKE 2)

3D Structure

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Related Domains

Browse other domains in SWIRM →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySWIRM(101.1.1.28)

Pfam Families

SWIRM domain

ClanCL0123HTH

External Links

AlphaFold DB: Q6YYZ1 UniProt: Q6YYZ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-145