ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VRH9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5VRH9_F1_nD4

Q5VRH9_F1_nD4

UID: 003454762

RepresentativeAlphaFold

Range: 316-610
AlphaFold: AF-Q5VRH9
UniProt: Q5VRH9 (all domains)
Gene: PUB12

Protein: U-box domain-containing protein 12 (EC 2.3.2.27) (Plant U-box protein 12) (OsPUB12) (RING-type E3 ubiquitin transferase PUB12)

3D Structure

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Related Domains

Browse other domains in Arm, Arm_2, ARM_PUB →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyArm, Arm_2, ARM_PUB(109.4.1.1612)

Pfam Families

Armadillo/beta-catenin-like repeat

ClanCL0020TPR

Armadillo-like

ClanCL0020TPR

PF25598ARM_PUB

Plant U-box protein ARM repeat region

ClanCL0020TPR

External Links

AlphaFold DB: Q5VRH9 UniProt: Q5VRH9

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 316-610