ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VRH9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5VRH9_F1_nD1

Q5VRH9_F1_nD1

UID: 003454763

AlphaFold

Range: 1-125
AlphaFold: AF-Q5VRH9
UniProt: Q5VRH9 (all domains)
Gene: PUB12

Protein: U-box domain-containing protein 12 (EC 2.3.2.27) (Plant U-box protein 12) (OsPUB12) (RING-type E3 ubiquitin transferase PUB12)

3D Structure

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Related Domains

Browse other domains in PUB10_N →

Classification

AArchitecturealpha bundles(a.7)

XX-groupN-cbl like(611)

HH-groupMixed lineage kinase domain-like (MLKL) N-terminal domain(611.7)

TT-groupMixed lineage kinase domain-like (MLKL) N-terminal domain(611.7.1)

FFamilyPUB10_N(611.7.1.13)

Pfam Families

PF25368PUB10_N

PUB10-like, N-terminal domain

ClanCL0792MLKL_N-like

External Links

AlphaFold DB: Q5VRH9 UniProt: Q5VRH9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-125