ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VNZ1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5VNZ1_F1_nD1

Q5VNZ1_F1_nD1

UID: 003455079

AlphaFold

Range: 471-615
AlphaFold: AF-Q5VNZ1
UniProt: Q5VNZ1 (all domains)
Gene: Os01g0383900

Protein: Os01g0383900 protein (cDNA clone:001-125-A12, full insert sequence)

3D Structure

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Related Domains

Browse other domains in Nucleoporin2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupZU5/Nup98-C/GAIN-B autoproteolytic domain-related(12.5)

TT-groupZU5/Nup98-C/GAIN-B autoproteolytic domain-related(12.5.1)

FFamilyNucleoporin2(12.5.1.4)

Pfam Families

PF04096Nucleoporin2

Nup98-96 autopeptidase S59

ClanCL0661Gain

External Links

AlphaFold DB: Q5VNZ1 UniProt: Q5VNZ1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 471-615