ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0N7KN41_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0N7KN41_F1_nD1

A0A0N7KN41_F1_nD1

UID: 003455716

AlphaFold

Range: 101-450
AlphaFold: AF-A0A0N7KN41
UniProt: A0A0N7KN41 (all domains)
Gene: Os07g0207600

Protein: endo-polygalacturonase (EC 3.2.1.15)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_hydro_28,Pectate_lyase_3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyGlyco_hydro_28,Pectate_lyase_3(207.2.1.2)

Pfam Families

PF00295Glyco_hydro_28

Glycosyl hydrolases family 28

ClanCL0268Pec_lyase-like

PF12708Pect-lyase_RHGA_epim

Rhamnogalacturonase A/epimerase, pectate lyase-like

ClanCL0268Pec_lyase-like

External Links

AlphaFold DB: A0A0N7KN41 UniProt: A0A0N7KN41

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 101-450