ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5Z5B2_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5Z5B2_F1_nD4

Q5Z5B2_F1_nD4

UID: 003456363

AlphaFold

Range: 561-730,1021-1030
AlphaFold: AF-Q5Z5B2
UniProt: Q5Z5B2 (all domains)
Gene: AGO1D

Protein: Protein argonaute 1D (OsAGO1d)

3D Structure

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Related Domains

Browse other domains in Piwi,ArgoMid →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMiddle domain in Argonaute homologs(7590)

HH-groupMiddle domain in Argonaute homologs(7590.1)

TT-groupMiddle domain in Argonaute homologs(7590.1.1)

FFamilyPiwi,ArgoMid(7590.1.1.3)

Pfam Families

Piwi domain

ClanCL0219RNase_H

PF16487ArgoMid

Mid domain of argonaute

External Links

AlphaFold DB: Q5Z5B2 UniProt: Q5Z5B2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-730,1021-1030