ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5Z5B2_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q5Z5B2_F1_nD5

Q5Z5B2_F1_nD5

UID: 003456384

AlphaFold

Range: 731-1000
AlphaFold: AF-Q5Z5B2
UniProt: Q5Z5B2 (all domains)
Gene: AGO1D

Protein: Protein argonaute 1D (OsAGO1d)

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPiwi(2484.1.1.26)

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

AlphaFold DB: Q5Z5B2 UniProt: Q5Z5B2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 731-1000