ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q0JD33_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q0JD33_F1_nD2

Q0JD33_F1_nD2

UID: 003457450

AlphaFold

Range: 186-485
AlphaFold: AF-Q0JD33
UniProt: Q0JD33 (all domains)
Gene: Os04g0434300

Protein: Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.8.4.5) (tRNA-t(6)A37 methylthiotransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q0JD33 UniProt: Q0JD33

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-485