ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5JMF9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5JMF9_F1_nD2

Q5JMF9_F1_nD2

UID: 003458505

AlphaFold

Range: 251-290
AlphaFold: AF-Q5JMF9
UniProt: Q5JMF9 (all domains)
Gene: Os01g0761100

Protein: Os01g0761100 protein (cDNA clone:J033127O09, full insert sequence)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupZn3Cys9 preSET domain-related(3358)

HH-groupZn3Cys9 preSET domain-related(3358.1)

TT-groupZn3Cys9 preSET domain-related(3358.1.1)

FFamilyTCR(3358.1.1.1)

Pfam Families

Tesmin/TSO1-like CXC domain, cysteine-rich domain

ClanCL0809CXC

External Links

AlphaFold DB: Q5JMF9 UniProt: Q5JMF9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 251-290