ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q6L4V9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q6L4V9_F1_nD2

Q6L4V9_F1_nD2

UID: 003459566

AlphaFold

Range: 186-250
AlphaFold: AF-Q6L4V9
UniProt: Q6L4V9 (all domains)
Gene: Os05g0509900

Protein: Os05g0509900 protein (cDNA clone:J023147N17, full insert sequence)

3D Structure

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Related Domains

Browse other domains in TFIIF_beta →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyTFIIF_beta(101.1.2.35)

Pfam Families

PF02270TFIIF_beta

TFIIF, beta subunit HTH domain

ClanCL0123HTH

External Links

AlphaFold DB: Q6L4V9 UniProt: Q6L4V9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-250