ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0P0XWD3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A0P0XWD3_F1_nD3

A0A0P0XWD3_F1_nD3

UID: 003460029

AlphaFold

Range: 106-300,446-520,566-700
AlphaFold: AF-A0A0P0XWD3
UniProt: A0A0P0XWD3 (all domains)
Gene: Os10g0506200

Protein: Valine--tRNA ligase, mitochondrial (EC 6.1.1.9) (Valyl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1(2005.1.1.1)

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

External Links

AlphaFold DB: A0A0P0XWD3 UniProt: A0A0P0XWD3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-300,446-520,566-700