ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0J6I4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q0J6I4_F1_nD2

Q0J6I4_F1_nD2

UID: 003461244

AlphaFold

Range: 81-165
UniProt: Q0J6I4 (all domains)
Gene: Os08g0315200

Protein: Os08g0315200 protein

3D Structure

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Related Domains

Browse other domains in Retrotrans_gag →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyRetrotrans_gag(170.2.1.12)

Pfam Families

PF03732PEG10_N-capsid

Retrotransposon-derived protein PEG10, N-terminal capsid-like domain

ClanCL0523GAG-polyprotein

External Links

UniProt: Q0J6I4

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