ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q0JBC2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0JBC2_F1_nD1

Q0JBC2_F1_nD1

UID: 003462273

AlphaFold

Range: 246-519
AlphaFold: AF-Q0JBC2
UniProt: Q0JBC2 (all domains)
Gene: Os04g0542900

Protein: Os04g0542900 protein (cDNA clone:J013155A07, full insert sequence)

3D Structure

Loading viewer...

Related Domains

Browse other domains in XendoU →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupRNase A-like(372)

HH-groupEndoU-like(372.2)

TT-groupEndoU-like(372.2.1)

FFamilyXendoU(372.2.1.1)

Pfam Families

Endoribonuclease XendoU

ClanCL0695EndoU

External Links

AlphaFold DB: Q0JBC2 UniProt: Q0JBC2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-519