ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5N9K2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5N9K2_F1_nD1

Q5N9K2_F1_nD1

UID: 003462768

AlphaFold

Range: 6-120
AlphaFold: AF-Q5N9K2
UniProt: Q5N9K2 (all domains)
Gene: Os01g0831200

Protein: EIP1 (Os01g0831200 protein) (cDNA clone:J023047C12, full insert sequence)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q5N9K2 UniProt: Q5N9K2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-120