ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B9FNL5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/B9FNL5_F1_nD4

B9FNL5_F1_nD4

UID: 003465173

AlphaFold

Range: 616-870
AlphaFold: AF-B9FNL5
UniProt: B9FNL5 (all domains)
Gene: Os05g0274200

Protein: DNA mismatch repair protein MSH2 (DNA mismatch repair protein Msh2)

3D Structure

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Related Domains

Browse other domains in MutS_V →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMutS_V(2004.1.1.45)

Pfam Families

MutS domain V

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: B9FNL5 UniProt: B9FNL5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 616-870