ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JML8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JML8_F1_nD1

Q5JML8_F1_nD1

UID: 003465351

AlphaFold

Range: 11-130
AlphaFold: AF-Q5JML8
UniProt: Q5JML8 (all domains)
Gene: Os01g0754100

Protein: DNA-binding protein (Os01g0754100 protein) (cDNA clone:J013108H01, full insert sequence)

3D Structure

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Related Domains

Browse other domains in Ssb-like_OB →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilySsb-like_OB(2.1.1.111)

Pfam Families

PF21473OB_Ssb-like

Single-stranded DNA binding protein Ssb-like, OB fold

ClanCL0021OB

External Links

AlphaFold DB: Q5JML8 UniProt: Q5JML8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-130