ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q2R4I5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q2R4I5_F1_nD2

Q2R4I5_F1_nD2

UID: 003465436

AlphaFold

Range: 156-235
AlphaFold: AF-Q2R4I5
UniProt: Q2R4I5 (all domains)
Gene: UBP5

Protein: Inactive ubiquitin-specific protease 5 (OsUBP5) (Protein FLOWER AND LEAF COLOR ABERRANT)

3D Structure

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Related Domains

Browse other domains in Ubiquitin_UBP8 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_UBP8(221.1.1.172)

Pfam Families

PF25242Ubiquitin_UBP8

UBP8-like, ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q2R4I5 UniProt: Q2R4I5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 156-235