ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q0DXS3_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q0DXS3_F1_nD4

Q0DXS3_F1_nD4

UID: 003466283

AlphaFold

Range: 246-340,451-725
AlphaFold: AF-Q0DXS3
UniProt: Q0DXS3 (all domains)
Gene: RDR1

Protein: Probable RNA-dependent RNA polymerase 1 (OsRDR1) (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in RdRP, RdRP_head →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupRNAi polymerase helical domain(3588)

HH-groupRNAi polymerase helical domain(3588.1)

TT-groupRNAi polymerase helical domain(3588.1.1)

FFamilyRdRP, RdRP_head(3588.1.1.2)

Pfam Families

RNA dependent RNA polymerase

PF26253RdRP_head

RdRP, head domain

External Links

AlphaFold DB: Q0DXS3 UniProt: Q0DXS3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-340,451-725