ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q0JHB5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0JHB5_F1_nD1

Q0JHB5_F1_nD1

UID: 003466656

AlphaFold

Range: 1-185,206-295
AlphaFold: AF-Q0JHB5
UniProt: Q0JHB5 (all domains)
Gene: Os01g0872900

Protein: Os01g0872900 protein (cDNA clone:002-111-B06, full insert sequence)

3D Structure

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Related Domains

Browse other domains in Plant_tran →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPlant_tran(2484.1.1.149)

Pfam Families

PF04827Plant_tran

Plant transposon protein

ClanCL0219RNase_H

External Links

AlphaFold DB: Q0JHB5 UniProt: Q0JHB5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-185,206-295