ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0JAK1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q0JAK1_F1_nD2

Q0JAK1_F1_nD2

UID: 003467249

AlphaFold

Range: 71-135
AlphaFold: AF-Q0JAK1
UniProt: Q0JAK1 (all domains)
Gene: Os04g0593600

Protein: Os04g0593600 protein

3D Structure

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Related Domains

Browse other domains in Rcat_RNF216 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupAriadne-1 protein homolog(376.1.4)

FFamilyRcat_RNF216(376.1.4.4)

Pfam Families

PF26200Rcat_RNF216

RNF216 Rcat domain

ClanCL0229RING

External Links

AlphaFold DB: Q0JAK1 UniProt: Q0JAK1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-135