ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q338J4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q338J4_F1_nD2

Q338J4_F1_nD2

UID: 003467352

AlphaFold

Range: 11-135,201-595
AlphaFold: AF-Q338J4
UniProt: Q338J4 (all domains)
Gene: LOC_Os10g26050

Protein: methionine--tRNA ligase (EC 6.1.1.10) (Methionyl-tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1g,Anticodon_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilytRNA-synt_1g,Anticodon_3(140.1.1.8)

Pfam Families

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

PF19303Anticodon_3

Anticodon binding domain of methionyl tRNA ligase

ClanCL0258DALR

External Links

AlphaFold DB: Q338J4 UniProt: Q338J4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-135,201-595