ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5SMK9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5SMK9_F1_nD3

Q5SMK9_F1_nD3

UID: 003467543

AlphaFold

Range: 181-260
AlphaFold: AF-Q5SMK9
UniProt: Q5SMK9 (all domains)
Gene: Os06g0183900

Protein: Os06g0183900 protein (cDNA clone:006-207-D12, full insert sequence)

3D Structure

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Related Domains

Browse other domains in Rtf2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyRtf2(376.1.1.61)

Pfam Families

Rtf2 RING-finger

ClanCL0229RING

External Links

AlphaFold DB: Q5SMK9 UniProt: Q5SMK9

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 181-260