ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5JK67_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5JK67_F1_nD2

Q5JK67_F1_nD2

UID: 003467985

AlphaFold

Range: 46-65,146-363
AlphaFold: AF-Q5JK67
UniProt: Q5JK67 (all domains)
Gene: Os01g0958100

Protein: Os01g0958100 protein (cDNA clone:001-017-E11, full insert sequence)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5JK67 UniProt: Q5JK67

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-65,146-363