ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3dbhL1 - ECOD Domain | ECOD

ECOD/Domains/e3dbhL1

e3dbhL1

UID: 000346852

PDB

Range: L:101-176
PDB: 3DBH chain L(all domains)
UniProt: Q15843 (all domains)
Gene: NEDD8

Molecule: Ubiquitin-like protein NEDD8 (Neddylin) (Neural precursor cell expressed developmentally down-regulated protein 8) (NEDD-8)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ubiquitin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyubiquitin(221.1.1.2)

Pfam Families

PF00240ubiquitin

Ubiquitin family

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 3DBH RCSB PDB: 3DBH PDBe: 3DBH UniProt: Q15843

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure