ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A0P0VYX0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0P0VYX0_F1_nD1

A0A0P0VYX0_F1_nD1

UID: 003468758

AlphaFold

Range: 1-105
AlphaFold: AF-A0A0P0VYX0
UniProt: A0A0P0VYX0 (all domains)
Gene: Os03g0423700

Protein: RING-type E3 ubiquitin transferase (EC 2.3.2.27)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ubiquitin_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyUbiquitin_2(221.1.1.52)

Pfam Families

PF14560Ubiquitin_2

Ubiquitin-like domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: A0A0P0VYX0 UniProt: A0A0P0VYX0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-105