ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5NB85_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q5NB85_F1_nD4

Q5NB85_F1_nD4

UID: 003469110

AlphaFold

Range: 596-685
AlphaFold: AF-Q5NB85
UniProt: Q5NB85 (all domains)
Gene: ARF1

Protein: Auxin response factor 1 (OsARF16)

3D Structure

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Related Domains

Browse other domains in AUX_IAA →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyAUX_IAA(221.1.1.13)

Pfam Families

PF02309AUX_IAA

AUX/IAA family

ClanCL0072Ubiquitin

External Links

AlphaFold DB: Q5NB85 UniProt: Q5NB85

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 596-685