ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A5K4ECD7_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4ECD7_F1_nD3

A0A5K4ECD7_F1_nD3

UID: 003477182

AlphaFold

Range: 406-520
AlphaFold: AF-A0A5K4ECD7
UniProt: A0A5K4ECD7 (all domains)

Protein: Putative polypyrimidine tract binding protein

3D Structure

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Related Domains

Browse other domains in RRM_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_5(304.9.1.23)

Pfam Families

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

ClanCL0221RRM

External Links

AlphaFold DB: A0A5K4ECD7 UniProt: A0A5K4ECD7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 406-520