ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4FGX6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4FGX6_F1_nD3

A0A5K4FGX6_F1_nD3

UID: 003477289

AlphaFold

Range: 861-928
AlphaFold: AF-A0A5K4FGX6
UniProt: A0A5K4FGX6 (all domains)

Protein: Cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit)

3D Structure

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Related Domains

Browse other domains in CPSF100_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupIntegrator IntS9/IntS11 C-terminal domain(331.23)

TT-groupIntegrator IntS9/IntS11 C-terminal domain(331.23.1)

FFamilyCPSF100_C(331.23.1.4)

Pfam Families

PF13299CPSF100_C

Cleavage and polyadenylation factor 2 C-terminal

External Links

AlphaFold DB: A0A5K4FGX6 UniProt: A0A5K4FGX6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 861-928