ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3by0C1 - ECOD Domain | ECOD

ECOD/Domains/e3by0C1

e3by0C1

UID: 000347746

PDB

Range: C:4-177
PDB: 3BY0 chain C(all domains)
UniProt: P80188 (all domains)
Gene: LCN2

Molecule: Neutrophil gelatinase-associated lipocalin

3D Structure

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Related Domains

Browse other domains in Lipocalin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyLipocalin(9.1.1.1)

Ligands

in contact, ≤ 4 Å

2,3-Dihydroxy-Benzoic AcidDBH
drugDrugBank DB01672
2,3,-DihydroxybenzoylserineDBS
drugDrugBank DB02710

Pfam Families

PF00061Lipocalin

Lipocalin / cytosolic fatty-acid binding protein family

ClanCL0116Calycin

External Links

ECOD PDB View: 3BY0 RCSB PDB: 3BY0 PDBe: 3BY0 UniProt: P80188

Downloads

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FE (III) IONFE

metalwithin 5 Å only

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.