ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A3Q0KMY1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A3Q0KMY1_F1_nD3

A0A3Q0KMY1_F1_nD3

UID: 003478526

AlphaFold

Range: 1056-1155
AlphaFold: AF-A0A3Q0KMY1
UniProt: A0A3Q0KMY1 (all domains)

Protein: Histone deacetylase,putative

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

AlphaFold DB: A0A3Q0KMY1 UniProt: A0A3Q0KMY1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1056-1155