ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A5K4F1X4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F1X4_F1_nD3

A0A5K4F1X4_F1_nD3

UID: 003479428

AlphaFold

Range: 286-820
UniProt: A0A5K4F1X4 (all domains)

Protein: Pre-mRNA-processing factor 6 (PRP6 homolog) (U5 snRNP-associated 102 kDa protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TPR_14, TPR_19, HAT_Syf1_CNRKL1_C, HAT_PRP39_N, PF29376 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_14, TPR_19, HAT_Syf1_CNRKL1_C, HAT_PRP39_N, PF29376(109.4.1.2756)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

PF23231HAT_Syf1_CNRKL1_C

Pre-mRNA-splicing factor Syf1/CRNKL1 C-terminal HAT repeat

ClanCL0020TPR

PF23240HAT_PRP39_N

PRP39 N-terminal HAT repeat

External Links

UniProt: A0A5K4F1X4

Downloads

TPR

PF29376PRP6_TPR

PRP6, TPR-like domain

ClanCL0020TPR