ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4F1E5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F1E5_F1_nD2

A0A5K4F1E5_F1_nD2

UID: 003479656

AlphaFold

Range: 146-275
AlphaFold: AF-A0A5K4F1E5
UniProt: A0A5K4F1E5 (all domains)

Protein: Ribosomal RNA-processing protein 40

3D Structure

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Related Domains

Browse other domains in RRP40_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRRP40_S1(2.1.1.107)

Pfam Families

PF21262RRP40_S1

Exosome complex component RRP40, S1 domain

ClanCL0021OB

External Links

AlphaFold DB: A0A5K4F1E5 UniProt: A0A5K4F1E5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 146-275