ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A5K4F0J6_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F0J6_F1_nD5

A0A5K4F0J6_F1_nD5

UID: 003480819

AlphaFold

Range: 441-605
AlphaFold: AF-A0A5K4F0J6
UniProt: A0A5K4F0J6 (all domains)

Protein: Integrase catalytic domain-containing protein

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A5K4F0J6 UniProt: A0A5K4F0J6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 441-605