ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G4VNY2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/G4VNY2_F1_nD1

G4VNY2_F1_nD1

UID: 003481222

AlphaFold

Range: 61-150
AlphaFold: AF-G4VNY2
UniProt: G4VNY2 (all domains)

Protein: Ubiquitin carboxyl-terminal hydrolase 39 (EC 3.4.19.12) (U4/U6.U5 tri-snRNP-associated 65 kDa protein)

3D Structure

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Related Domains

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Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

AlphaFold DB: G4VNY2 UniProt: G4VNY2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-150