ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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G4V5M8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/G4V5M8_F1_nD1

G4V5M8_F1_nD1

UID: 003481757

AlphaFold

Range: 176-225
AlphaFold: AF-G4V5M8
UniProt: G4V5M8 (all domains)

Protein: E3 ubiquitin-protein ligase Hakai (EC 2.3.2.27)

3D Structure

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Related Domains

Browse other domains in zf-C3HC4_3 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-C3HC4_3(376.1.1.22)

Pfam Families

PF13920zf-C3HC4_3

Zinc finger, C3HC4 type (RING finger)

ClanCL0229RING

External Links

AlphaFold DB: G4V5M8 UniProt: G4V5M8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-225