ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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A0A3Q0KJU1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A3Q0KJU1_F1_nD1

A0A3Q0KJU1_F1_nD1

UID: 003487365

AlphaFold

Range: 6-135
UniProt: A0A3Q0KJU1 (all domains)

Protein: Upf3 regulator of nonsense transcripts-like protein

3D Structure

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Related Domains

Browse other domains in Smg4_UPF3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilySmg4_UPF3(304.9.1.6)

Pfam Families

PF03467Smg4_UPF3

Smg-4/UPF3 family

ClanCL0221RRM

External Links

UniProt: A0A3Q0KJU1

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