ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4F1D2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F1D2_F1_nD1

A0A5K4F1D2_F1_nD1

UID: 003488046

AlphaFold

Range: 36-265,311-345,371-630,651-850
AlphaFold: AF-A0A5K4F1D2
UniProt: A0A5K4F1D2 (all domains)

Protein: Host cell factor-related

3D Structure

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Related Domains

Browse other domains in INTS1_RP2B-bd →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyINTS1_RP2B-bd(109.4.1.393)

Pfam Families

PF12432INTS1_RP2B-bd

Integrator complex subunit 1, RP2B-binding domain

ClanCL0020TPR

External Links

AlphaFold DB: A0A5K4F1D2 UniProt: A0A5K4F1D2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-265,311-345,371-630,651-850