ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4EF93_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4EF93_F1_nD4

A0A5K4EF93_F1_nD4

UID: 003489543

AlphaFold

Range: 136-175,271-555
AlphaFold: AF-A0A5K4EF93
UniProt: A0A5K4EF93 (all domains)

Protein: Nonsense-mediated mRNA decay protein 1 (Rent1),putative

3D Structure

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Related Domains

Browse other domains in AAA_11 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_11(2004.1.1.184)

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: A0A5K4EF93 UniProt: A0A5K4EF93

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-175,271-555