ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4F114_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F114_F1_nD1

A0A5K4F114_F1_nD1

UID: 003490447

AlphaFold

Range: 11-80,141-230,371-395
AlphaFold: AF-A0A5K4F114
UniProt: A0A5K4F114 (all domains)

Protein: Trafficking protein particle complex subunit 8

3D Structure

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Related Domains

Browse other domains in TRAPPC-Trs85 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyTRAPPC-Trs85(2004.1.1.325)

Pfam Families

PF12739TRAPPC-Trs85

ER-Golgi trafficking TRAPP I complex 85 kDa subunit

External Links

AlphaFold DB: A0A5K4F114 UniProt: A0A5K4F114

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-80,141-230,371-395