ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4F1L5_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F1L5_F1_nD4

A0A5K4F1L5_F1_nD4

UID: 003492535

RepresentativeAlphaFold

Range: 481-935
AlphaFold: AF-A0A5K4F1L5
UniProt: A0A5K4F1L5 (all domains)

Protein: Pre-mRNA-processing factor 6 (PRP6 homolog) (U5 snRNP-associated 102 kDa protein)

3D Structure

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Related Domains

Browse other domains in TPR_14, TPR_19, HAT_PRP39_N, PRP6_TPR →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_14, TPR_19, HAT_PRP39_N, PRP6_TPR(109.4.1.2754)

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

PF23240HAT_PRP39_N

PRP39 N-terminal HAT repeat

ClanCL0020TPR

PF29376PRP6_TPR

PRP6, TPR-like domain

ClanCL0020TPR

External Links

AlphaFold DB: A0A5K4F1L5 UniProt: A0A5K4F1L5

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 481-935