ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A5K4EZD4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4EZD4_F1_nD1

A0A5K4EZD4_F1_nD1

UID: 003492976

AlphaFold

Range: 11-70,96-200,231-250,346-385
AlphaFold: AF-A0A5K4EZD4
UniProt: A0A5K4EZD4 (all domains)

Protein: tRNA pseudouridine(55) synthase (EC 5.4.99.25)

3D Structure

Loading viewer...

Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

External Links

AlphaFold DB: A0A5K4EZD4 UniProt: A0A5K4EZD4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-70,96-200,231-250,346-385