ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4FFC6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4FFC6_F1_nD3

A0A5K4FFC6_F1_nD3

UID: 003494020

AlphaFold

Range: 1061-1570,1681-1765,1791-2125,2146-2230
AlphaFold: AF-A0A5K4FFC6
UniProt: A0A5K4FFC6 (all domains)

Protein: E3 ubiquitin-protein ligase listerin (EC 2.3.2.27) (RING-type E3 ubiquitin transferase listerin)

3D Structure

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Related Domains

Browse other domains in UBC_like →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyUBC_like(109.4.1.882)

Pfam Families

PF23009UBC_like

Ubiquitin conjugating domain-like

ClanCL0208UBC

External Links

AlphaFold DB: A0A5K4FFC6 UniProt: A0A5K4FFC6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1061-1570,1681-1765,1791-2125,2146-2230