ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4FAZ2_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4FAZ2_F1_nD4

A0A5K4FAZ2_F1_nD4

UID: 003495120

AlphaFold

Range: 1336-1390,1416-1435,1496-1530,1561-1705,1741-1860,1901-2200
AlphaFold: AF-A0A5K4FAZ2
UniProt: A0A5K4FAZ2 (all domains)

Protein: Nuclear pore complex protein Nup98-Nup96

3D Structure

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Related Domains

Browse other domains in Nup96 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilyNup96(109.21.1.2)

Pfam Families

Nuclear protein 96

External Links

AlphaFold DB: A0A5K4FAZ2 UniProt: A0A5K4FAZ2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1336-1390,1416-1435,1496-1530,1561-1705,1741-1860,1901-2200